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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841918.1_cds_XP_016508177.1_21228
CDS Infomation

[gene=LOC107825779] [db_xref=GeneID:107825779] [protein=LOW QUALITY PROTEIN: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like] [exception=unclassified translation discrepancy] [protein_id=XP_016508177.1] [location=complement(join(103863..103898,104661..104765,104768..104881,104997..105118,105214..105335,105419..105673,105753..105916,105996..106117,106192..106366,106984..107070,107152..107454,107539..107594,108641..108722,108796..108863,108959..109015,109091..109156,109233..109304,111113..111215))] [gbkey=CDS]
Sequence

ATGAGTAGCAATCCAAAGGGAAGAACAACAATTGAAGTAGGAGCTGATGGAGTTGCTGTT
ATTACAATTATTAATCCTCCTGTCAATTCCCTTTCCTTAGACGTGCTGTACAGCTTGAAA
GAGAGCTATGAGCAGGCCTTAAAAAGGGATGATGTGAAAGCAATTGTTGTGACAGGTGCA
AAGGGCAAGTTCTCTGGTGGTTTTGATATCAGTGCCTTCGGTAAACTGCAAGGAGGAACA
GTCGAATCACCAAAACCTGGTTTTATATCTGTGGAGATTCTCACTGACACTGTGGAAGCT
GCAAGAAAACCTTCCGTGGCGGCAATTGATGGTCTCGCTCTAGGTGGAGGACTAGAAGTT
GCAATGGCTTGTCATGCACGTATTTCTACTCCTAATGCACAACTTGGATTGCCAGAACTT
CAACTTGGAATACTTCCTGGATTTGGAGGTACTCAGCGGCTTCCACGCCTCGTGGGTCTT
GCTAAGTCCCTCGAAATGATGCTTACGTCCAAGCCCGTTAAAGGAGAGGAAGCTTTTAAT
GTGGGCCTTGTTGATGCTGTAGTTTCATCAAACCAATTATTGGATACTGCTCGTAAGTGG
GCTCTTGATATTTTGGAACGCAGAAAACCTTGGGTTGCCAGTCTTCATAAAACTGATAAG
ATAGAGCCTCTTGGTGAGGCAAGGGAAATATTAAAATTTGCAAGAGTTCAAACGCGCAGA
CAGGCTCCAAATCTCCAGCATCCATTAGTCTGCATTGATGTTGTTGAAGAGGGTATAGTG
TCTGGTCCACGTGCTGGGCTTTGGAAGGAGGCTGAAGCATTCCAAGGTCTTCTACATTCA
GACACTTGCAAGGCCTTGGTCAACATTTTCTTTGCTCAGCGTGGAACCACAAAGGTACCT
GGAGTGACTGATTTAGGATTAGTACCACGACGCATAAAAAAGGTTGCAATTCTTGGAGGT
GGTTTAATGGGTTCTGGAATTGCAACTGCACTGCTGCTTAGTGGCTATCCAGTGATCTTG
AAAGAGGTTAATGACAAATTCCTACAGGCCGGGATGGGTAGAGTAAAAGCCAATTTGCAA
AGCAGCGTCAAGAAAGGGAAAATGAGTCCAGAGAAGTTTGAAAAGACTCTCTCCCTACTC
AAGGGTTCTCTCGATTATGAAAGTTTTAGGGATGTGGACATGGTCATTGAGGCTGTCATC
GAGAATGTATCTTTAAAGCAGCAAATATTTGCTGATCTTGAGAAGTATTGCCCTTCACAT
TGCATTCTAGCAAGTAACACTTCTACGATTGACTTGAATTTGATTGGGGAAAAGACCAGA
TCTCAAGATCGTATTATCGGAGCTCACTTTTTCAGTCCGGCTCATGTGATGCCACTCTTG
GAAATTGTCCGCACCCAGAAGACATCGCCCCAAGTAATTGTAGACTTGCTTGATGTTGGC
AAGAAGATAAGGAAAACCCCTGTGGTAGTTGGGAACTGCACTGGGTTTGCTGTCAACAGA
ATGTTCTTTCCTTACACCCAAGCCGCTCTTTTGTTAGTTGAACGTGGAACAGATGTCTAC
CGCATCGATAAGGCCATCACTAAATTTGGCATGCCAATGGGTCCCTTCAGATTATGTGAT
CTTGTTGGTTTTGGTGTTGCAATTGCCACTGGTGGGCAATTTGTGATGAATTTCCCGGAG
AGAACTTACAAATCAATGTTGATACCGCTCATGCAAGAAGATAAAAGAGCTGGTGAAACT
ACTCGGAAAGGGTTTTATGTATATGACGATAGACGTAAAGCGAGCCCAGATCCAGAAATA
AAGAAATATATTGAGAAGGCAAGAGAGATGTCTGGTGTTACCATTGACCCTAAGCTGGCA
AAACTCTCGGACAAGGACATTATAGAGATGATTTTCTTCCCTGTGGTAAATGAAGCCTGT
AGAGTGCTTGCAGAAGGTATTGCAGTCAAAGCTTCCGATCTTGACATTNCCAAATACATC
TGTTCAAGGTTGGATGAGTGGTCAAGAATGTATGGAGACTTTTTCAAGCCTTGCTCCTAC
CTAGCTGAAAGAGCTGCCAAGGGGGCTCCGCTGAGTTCTACAATGGATCCATCAAAGTCG
CGCTTGTAA

Peptide Sequence

PEP ID

XP_016508177.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like [Nicotiana tabacum]
Sequence

MSSNPKGRTTIEVGADGVAVITIINPPVNSLSLDVLYSLKESYEQALKRDDVKAIVVTGA
KGKFSGGFDISAFGKLQGGTVESPKPGFISVEILTDTVEAARKPSVAAIDGLALGGGLEV
AMACHARISTPNAQLGLPELQLGILPGFGGTQRLPRLVGLAKSLEMMLTSKPVKGEEAFN
VGLVDAVVSSNQLLDTARKWALDILERRKPWVASLHKTDKIEPLGEAREILKFARVQTRR
QAPNLQHPLVCIDVVEEGIVSGPRAGLWKEAEAFQGLLHSDTCKALVNIFFAQRGTTKVP
GVTDLGLVPRRIKKVAILGGGLMGSGIATALLLSGYPVILKEVNDKFLQAGMGRVKANLQ
SSVKKGKMSPEKFEKTLSLLKGSLDYESFRDVDMVIEAVIENVSLKQQIFADLEKYCPSH
CILASNTSTIDLNLIGEKTRSQDRIIGAHFFSPAHVMPLLEIVRTQKTSPQVIVDLLDVG
KKIRKTPVVVGNCTGFAVNRMFFPYTQAALLLVERGTDVYRIDKAITKFGMPMGPFRLCD
LVGFGVAIATGGQFVMNFPERTYKSMLIPLMQEDKRAGETTRKGFYVYDDRRKASPDPEI
KKYIEKAREMSGVTIDPKLAKLSDKDIIEMIFFPVVNEACRVLAEGIAVKASDLDIXKYI
CSRLDEWSRMYGDFFKPCSYLAERAAKGAPLSSTMDPSKSRL

Transcript Sequence

Gene sequence data has not been registered.